论文标题
机器学习和基于AI的生物活性配体发现和GPCR配体识别方法
Machine learning and AI-based approaches for bioactive ligand discovery and GPCR-ligand recognition
论文作者
论文摘要
在过去的十年中,机器学习和人工智能应用在学术研究和行业中都大大提高了绩效和关注。大多数最新的最新方法背后的成功归因于深度学习的最新发展。当应用于与非尾数据处理有关的各种科学领域(例如,图像或文本)时,深度学习被证明不仅胜过传统的机器学习,而且胜过域专家开发的高度专业化工具。这篇评论旨在总结基于AI的GPCR生物活性配体发现的研究,并特别关注最近的成就和研究趋势。为了使这篇文章可以访问计算科学家的广泛受众,我们提供了有关基础方法的启发性解释,包括对最常用的深度学习架构的概述和分子数据的特征表示。我们重点介绍了最新的基于AI的研究,该研究成功地发现了GPCR生物活性配体。但是,这篇评论的平等重点是对基于机器学习的技术的讨论,该技术已应用于配体发现,并有可能为未来成功的GPCR生物活性配体发现铺平道路。这篇综述以简短的前景结束,重点介绍了深度学习的最新研究趋势,例如积极学习和半监督学习,这些学习具有促进生物活性配体发现的巨大潜力。
In the last decade, machine learning and artificial intelligence applications have received a significant boost in performance and attention in both academic research and industry. The success behind most of the recent state-of-the-art methods can be attributed to the latest developments in deep learning. When applied to various scientific domains that are concerned with the processing of non-tabular data, for example, image or text, deep learning has been shown to outperform not only conventional machine learning but also highly specialized tools developed by domain experts. This review aims to summarize AI-based research for GPCR bioactive ligand discovery with a particular focus on the most recent achievements and research trends. To make this article accessible to a broad audience of computational scientists, we provide instructive explanations of the underlying methodology, including overviews of the most commonly used deep learning architectures and feature representations of molecular data. We highlight the latest AI-based research that has led to the successful discovery of GPCR bioactive ligands. However, an equal focus of this review is on the discussion of machine learning-based technology that has been applied to ligand discovery in general and has the potential to pave the way for successful GPCR bioactive ligand discovery in the future. This review concludes with a brief outlook highlighting the recent research trends in deep learning, such as active learning and semi-supervised learning, which have great potential for advancing bioactive ligand discovery.