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Even though the Convolutional Neural Networks (CNN) has shown superior results in the field of computer vision, it is still a challenging task to implement computer vision algorithms in real-time at the edge, especially using a low-cost IoT device due to high memory consumption and computation complexities in a CNN. Network compression methodologies such as weight pruning, filter pruning, and quantization are used to overcome the above mentioned problem. Even though filter pruning methodology has shown better performances compared to other techniques, irregularity of the number of filters pruned across different layers of a CNN might not comply with majority of the neural computing hardware architectures. In this paper, a novel greedy approach called cluster pruning has been proposed, which provides a structured way of removing filters in a CNN by considering the importance of filters and the underlying hardware architecture. The proposed methodology is compared with the conventional filter pruning algorithm on Pascal-VOC open dataset, and Head-Counting dataset, which is our own dataset developed to detect and count people entering a room. We benchmark our proposed method on three hardware architectures, namely CPU, GPU, and Intel Movidius Neural Computer Stick (NCS) using the popular SSD-MobileNet and SSD-SqueezeNet neural network architectures used for edge-AI vision applications. Results demonstrate that our method outperforms the conventional filter pruning methodology, using both datasets on above mentioned hardware architectures. Furthermore, a low cost IoT hardware setup consisting of an Intel Movidius-NCS is proposed to deploy an edge-AI application using our proposed pruning methodology.