论文标题
多站点婴儿脑分割算法:ISEG-2019挑战
Multi-Site Infant Brain Segmentation Algorithms: The iSeg-2019 Challenge
论文作者
论文摘要
为了更好地了解健康和无序的早期大脑生长模式,至关重要的是将婴儿脑磁共振(MR)图像精确分为白质(WM),灰质(GM)和脑脊液(CSF)至关重要。基于深度学习的方法已经实现了最先进的表现;但是,主要限制之一是,基于学习的方法可能会遭受多站点问题的困扰,即,从一个站点上训练在数据集上的模型可能不适用于从具有不同成像协议/扫描仪的其他站点获得的数据集。为了促进社区的方法论发展,Iseg-2019挑战(http://iseg2019.web.unc.edu)提供了来自多个站点的6个月婴儿受试者,这些受试者具有不同的协议/扫描仪的参与方法。培训/验证主题来自UNC(地图),测试对象来自UNC/UMN(BCP),斯坦福大学和埃默里大学。到撰写本文时,有30种自动分割方法参加了ISEG-2019。我们通过详细介绍他们的管道/实现,呈现实验结果,并根据整个大脑,感兴趣的区域和Gyral Landmark曲线评估绩效,从而回顾了8个排名最高的团队。我们还讨论了它们的局限性以及多站点问题的未来指示。我们希望Iseg-2019中的多站点数据集,本评论文章将吸引更多有关多站点问题的研究人员。
To better understand early brain growth patterns in health and disorder, it is critical to accurately segment infant brain magnetic resonance (MR) images into white matter (WM), gray matter (GM), and cerebrospinal fluid (CSF). Deep learning-based methods have achieved state-of-the-art performance; however, one of major limitations is that the learning-based methods may suffer from the multi-site issue, that is, the models trained on a dataset from one site may not be applicable to the datasets acquired from other sites with different imaging protocols/scanners. To promote methodological development in the community, iSeg-2019 challenge (http://iseg2019.web.unc.edu) provides a set of 6-month infant subjects from multiple sites with different protocols/scanners for the participating methods. Training/validation subjects are from UNC (MAP) and testing subjects are from UNC/UMN (BCP), Stanford University, and Emory University. By the time of writing, there are 30 automatic segmentation methods participating in iSeg-2019. We review the 8 top-ranked teams by detailing their pipelines/implementations, presenting experimental results and evaluating performance in terms of the whole brain, regions of interest, and gyral landmark curves. We also discuss their limitations and possible future directions for the multi-site issue. We hope that the multi-site dataset in iSeg-2019 and this review article will attract more researchers on the multi-site issue.