论文标题

随机低聚物的连接导致自催化序列网络的出现

Ligation of random oligomers leads to emergence of autocatalytic sequence network

论文作者

Kudella, Patrick W., Tkachenko, Alexei V., Maslov, Sergei, Braun, Dieter

论文摘要

在生命的曙光中,从随机短链中较长的信息携带和功能性核苷酸聚合物的出现是主要的垫脚石。但是在温度振荡下这些聚合物的形成需要某种形式的选择。合理的机制是基于模板的连接,理论工作已经表明信息熵减少。在这里,我们展示了在经受基于酶的模板连接反应和温度循环的随机12mer DNA序列系统中如何出现非平凡的序列模式。链既充当反应的模板和底物,从而形成更长的低聚物。对模板序列的选择导致了多尺度连接格局的发展。位置依赖性序列模式出现在富含A和T序序列的相互互补池中。即使没有选择功能,DNA与连接的基本配对也显示出类似于达尔文进化的动力学。

The emergence of longer information-carrying and functional nucleotide polymers from random short strands was a major stepping stone at the dawn of life. But the formation of those polymers under temperature oscillation required some form of selection. A plausible mechanism is template-based ligation where theoretical work already suggested a reduction in information entropy. Here, we show how nontrivial sequence patterns emerge in a system of random 12mer DNA sequences subject to enzyme-based templated ligation reaction and temperature cycling. The strands acted both as a template and substrates of the reaction and thereby formed longer oligomers. The selection for templating sequences leads to the development of a multiscale ligation landscape. A position-dependent sequence pattern emerged with a segregation into mutually complementary pools of A-rich and T-rich sequences. Even without selection for function, the base pairing of DNA with ligation showed a dynamics resembling Darwinian evolution.

扫码加入交流群

加入微信交流群

微信交流群二维码

扫码加入学术交流群,获取更多资源