论文标题

COVID-19使用新病毒变异和疫苗接种模型进行预测

COVID-19 forecasting using new viral variants and vaccination effectiveness models

论文作者

Rashed, Essam A., Kodera, Sachiko, Hirata, Akimasa

论文摘要

背景:最近,在疫苗接种率相对较高的地区,已经报告了大量的每日阳性19例阳性病例。因此,助推器疫苗接种已成为必要。此外,尚未深入讨论由不同变体和相关因素引起的感染。具有较大的变异性和不同的共同因素,很难使用常规数学模型来预测COVID-19的发生率。 方法:基于长期短期记忆的机器学习被应用于预测新每日阳性病例(DPC),严重病例,住院病例和死亡的时间序列。从以色列等疫苗接种率高的地区获得的数据与日本其他地区的当前数据混合在一起,以考虑疫苗接种的潜在影响。还考虑了病毒变体的疫苗接种以及降低的保护,比率和感染性的症状感染提供的保护。为了代表公共行为的变化,分析中还包括通过社交媒体进行的公共流动性和互动。 研究结果:比较特拉维夫,以色列观察到的新DPC,表征疫苗接种有效性和免受感染的减弱保护的参数得到了很好的估计; 5个月后第二剂量的疫苗接种效率和三角变体感染两周后的第三剂量分别为0.24和0.95。使用有关疫苗接种效果的提取参数,复制了日本三个州的新病例。

Background: Recently, a high number of daily positive COVID-19 cases have been reported in regions with relatively high vaccination rates; hence, booster vaccination has become necessary. In addition, infections caused by the different variants and correlated factors have not been discussed in depth. With large variabilities and different co-factors, it is difficult to use conventional mathematical models to forecast the incidence of COVID-19. Methods: Machine learning based on long short-term memory was applied to forecasting the time series of new daily positive cases (DPC), serious cases, hospitalized cases, and deaths. Data acquired from regions with high rates of vaccination, such as Israel, were blended with the current data of other regions in Japan to factor in the potential effects of vaccination. The protection provided by symptomatic infection was also considered in terms of the population effectiveness of vaccination as well as the waning protection and ratio and infectivity of viral variants. To represent changes in public behavior, public mobility and interactions through social media were also included in the analysis. Findings: Comparing the observed and estimated new DPC in Tel Aviv, Israel, the parameters characterizing vaccination effectiveness and the waning protection from infection were well estimated; the vaccination effectiveness of the second dose after 5 months and the third dose after two weeks from infection by the delta variant were 0.24 and 0.95, respectively. Using the extracted parameters regarding vaccination effectiveness, new cases in three prefectures of Japan were replicated.

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