论文标题
突变体covid-19菌株预测的量子深度学习
Quantum Deep Learning for Mutant COVID-19 Strain Prediction
论文作者
论文摘要
新的Covid-19-19-Delta和Omicron等新的Covid菌株随着传播性和致病性的增加而迅速散布在全世界,同时在大流行时期导致高死亡率。基于可用的突变的SARS-COV-2 RNA序列,可能会导致早期预防和治疗,从而早期预测COVID-19可能的变异(尤其是峰值蛋白)。在这里,我们将量子和量子启发的算法的优势与深度学习的广泛应用相结合,我们提出了一种名为DeepQuantum的开发工具,并使用该软件实现了预测Covid-19的峰值蛋白质变异结构的目标。此外,该混合量子古典模型首次实现了量子启发的模糊卷积,类似于经典的深度卷积,也成功地使用量子电路应用了量子渐进式训练,这两者都可以保证我们的模型是著名样式GAN的量子。结果表明,随机产生峰值蛋白质变异结构的保真度始终超过96%,而Omicron的保真度始终超过94%。与相应的经典算法相比,训练损失曲线更稳定,并且通过多个损失功能的收敛效果更好。最后,量子启发算法的证据促进了经典的深度学习和混合模型有效地预测突变菌株的强大。
New COVID-19 epidemic strains like Delta and Omicron with increased transmissibility and pathogenicity emerge and spread across the whole world rapidly while causing high mortality during the pandemic period. Early prediction of possible variants (especially spike protein) of COVID-19 epidemic strains based on available mutated SARS-CoV-2 RNA sequences may lead to early prevention and treatment. Here, combining the advantage of quantum and quantum-inspired algorithms with the wide application of deep learning, we propose a development tool named DeepQuantum, and use this software to realize the goal of predicting spike protein variation structure of COVID-19 epidemic strains. In addition, this hybrid quantum-classical model for the first time achieves quantum-inspired blur convolution similar to classical depthwise convolution and also successfully applies quantum progressive training with quantum circuits, both of which guarantee that our model is the quantum counterpart of the famous style-based GAN. The results state that the fidelities of random generating spike protein variation structure are always beyond 96% for Delta, 94% for Omicron. The training loss curve is more stable and converges better with multiple loss functions compared with the corresponding classical algorithm. At last, evidences that quantum-inspired algorithms promote the classical deep learning and hybrid models effectively predict the mutant strains are strong.