论文标题

使用改良的SIR模型对冠状病毒SARS-COV-2大流行的动力学进行建模,并具有有效繁殖数的“阻尼振荡器”动力学

Modeling the Dynamics of the Coronavirus SARS-CoV-2 Pandemic using Modified SIR Model with the 'Damped-Oscillator' Dynamics of the Effective Reproduction Number

论文作者

Ginzburg, Anne V., Ginzburg, Valeriy V., Ginzburg, Julia O., Arias, Ana Garcia, Rakesh, Leela

论文摘要

199年的大流行一直是一场巨大的灾难,颠覆了人类的生命,并在世界各地造成了数百万次死亡。该病毒的迅速传播,其早期指数增长和随后的“波浪”捕获了许多医疗专业人员和决策者。即使流行病学模型已近一个世纪以来(自1918 - 20年的“西班牙流感”大流行以来),SARS-COV-2病毒的现实生活经常使建模者感到困惑。虽然没有疑问的流行病学模型(如​​SEIR(易感性感染反射)或SIR(易感性暴露感染)的一般框架,但事实证明,模型参数的行为是不可预测且复杂的。 In particular, while the 'basic' reproduction number, R0, can be considered a constant (for the original SARS-CoV-2 virus, prior to the emergence of variants, R0 is between 2.5 and 3.0), the 'effective' reproduction number, R(t), was a complex function of time, influenced by human behavior in response to the pandemic (e.g., masking, lockdowns, transition to remote work, etc.) To better understand these phenomena, we model大流行的第一年(在2020年2月至2021年2月之间)使用简单的SIR模型,用于许多地区(美国五十个州以及几个国家)。我们表明,可以通过假设R(t)以“粘弹性”方式表现出大流行的演变,可以作为“粘弹性”方式,作为具有不同固有频率和阻尼系数的两个或三个“阻尼振荡器”的总和。这些振荡器可能对应于对提出的缓解措施有不同反应的不同子群。所提出的方法可以为未来的数据建模者提供新的方法,以随着时间的流逝而适应繁殖数的演变(与当今最普遍的数据驱动的方法相比)。

The COVID-19 pandemic has been a great catastrophe that upended human lives and caused millions of deaths all over the world. The rapid spread of the virus, with its early-stage exponential growth and subsequent 'waves', caught many medical professionals and decision-makers unprepared. Even though epidemiological models have been known for almost a century (since the 'Spanish Influenza' pandemic of 1918-20), the real-life spread of the SARS-CoV-2 virus often confounded the modelers. While the general framework of epidemiological models like SEIR (susceptible-exposed-infected-recovered) or SIR (susceptible-exposed-infected) was not in question, the behavior of model parameters turned out to be unpredictable and complicated. In particular, while the 'basic' reproduction number, R0, can be considered a constant (for the original SARS-CoV-2 virus, prior to the emergence of variants, R0 is between 2.5 and 3.0), the 'effective' reproduction number, R(t), was a complex function of time, influenced by human behavior in response to the pandemic (e.g., masking, lockdowns, transition to remote work, etc.) To better understand these phenomena, we model the first year of the pandemic (between February 2020 and February 2021) for a number of localities (fifty US states, as well as several countries) using a simple SIR model. We show that the evolution of the pandemic can be described quite successfully by assuming that R(t) behaves in a 'viscoelastic' manner, as a sum of two or three 'damped oscillators' with different natural frequencies and damping coefficients. These oscillators likely correspond to different sub-populations having different reactions to proposed mitigation measures. The proposed approach can offer future data modelers new ways to fit the reproduction number evolution with time (as compared to the purely data-driven approaches most prevalent today).

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