论文标题

实时反馈驱动的单粒子跟踪技术的理论比较

Theoretical comparison of real-time feedback-driven single-particle tracking techniques

论文作者

van Heerden, Bertus, Krüger, Tjaart P. J.

论文摘要

实时反馈驱动的单粒子跟踪是一种使用反馈控制来实现在天然或近本环境中自由扩散颗粒的单分子光谱的技术。存在许多不同的RT-FD-SPT方法,由于样品和设置的差异,基于实验结果的方法之间的比较有限。在这项研究中,我们使用统计计算和动态模拟直接比较不同方法的性能。所考虑的方法是轨道方法,骑士巡回赛(网格扫描)方法和MINFLUX,我们考虑了基于荧光的和干涉散射(ISCAT)方法。精确度和速度之间存在基本的权衡,骑士的巡回赛方法能够跟踪最快的扩散,但精度低,而Minflux是最精确的,但仅跟踪慢速扩散。为了比较ISCAT和荧光,考虑了不同的生物样品,包括标记和内在的荧光样品。与荧光相比,ISCAT的成功在很大程度上取决于荧光颗粒的粒径以及密度和光物理特性。使用轨道粒子可忽略地吸收的ISCAT的波长可以提高照明强度,从而导致ISCAT为大多数样品提供更好的跟踪。这项工作强调了RT-FD-SPT中性能的基本方面,并应帮助选择适合特定应用的方法。所使用的方法很容易扩展到其他RT-FD-SPT方法。

Real-time feedback-driven single-particle tracking is a technique that uses feedback control to enable single-molecule spectroscopy of freely diffusing particles in native or near-native environments. A number of different RT-FD-SPT approaches exist, and comparisons between methods based on experimental results are of limited use due to differences in samples and setups. In this study, we used statistical calculations and dynamical simulations to directly compare the performance of different methods. The methods considered were the orbital method, the Knight`s Tour (grid scan) method and MINFLUX, and we considered both fluorescence-based and interferometric scattering (iSCAT) approaches. There is a fundamental trade-off between precision and speed, with the Knight`s Tour method being able to track the fastest diffusion but with low precision, and MINFLUX being the most precise but only tracking slow diffusion. To compare iSCAT and fluorescence, different biological samples were considered, including labeled and intrinsically fluorescent samples. The success of iSCAT as compared to fluorescence is strongly dependent on the particle size and the density and photophysical properties of the fluorescent particles. Using a wavelength for iSCAT that is negligibly absorbed by the tracked particle allows an increased illumination intensity, which results in iSCAT providing better tracking for most samples. This work highlights the fundamental aspects of performance in RT-FD-SPT and should assist with the selection of an appropriate method for a particular application. The approach used can easily be extended to other RT-FD-SPT methods.

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